See change log
See manual
Please cite
Akifumi Yamashita, Tsuyoshi Sekizuka, and Makoto Kuroda
GcoGSA-BA: A Global Core Genome SNP Analysis for Bacillus anthracis
Health Security. 13(1) (2015) 64-68. doi:10.1089/hs.2014.0076.
Global core Genome SNP Analysis for Bacillus anthracis
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This tool is for Research Use Only. It has not been approved, cleared, or licensed by any regulatory authority. By submitting sequence data the user acknowledges no intended medical purpose or objective such as clinical diagnosis, patient management, or human clinical trials.

Some outcomes from your analysis may be used for debugging and to improve the efficiency of our tool but not for any other purpose. The result of analysis and data submitted will be removed after 7 days.

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  • Input your sequence reads (Only .fastq.gz up to 30GBytes in total are acceptable.)

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Phylocore genome tree of the original data set.

Reference genome: Bacillus anthracis str. 'Ames Ancestor' chromosome, complete genome. (gi|50196905|ref|NC_007530.2)

Traditional tree shape
Newick formatted data
MEGA formatted data
SNP allele table (compressed 13MBytes)